PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010096512.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

G2-like

Protein Properties

Length: 353aa MW: 38325.8 Da PI: 5.682

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010096512.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37.8	4.2e-12	51	75	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 kprlrWt +LHerFv+av+qLGG+ XP_010096512.1 51 KPRLRWTADLHERFVDAVTQLGGAS 75 79*********************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.0E-10	48	76	IPR009057	Homeodomain-like
Pfam	PF14379	1.9E-14	180	225	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence Send to blast
MFPRLIQVQA HEGMMGQEDI QIQGVGLGGH GHGHGQNLRG DPCLVLTSDP KPRLRWTADL 60 HERFVDAVTQ LGGASSQSYA KGHHADDECE GTDSFPLKES PPAIIKTSPV ELLDGQKSNS 120 YGHIADELHF FPTFQKYRLG IQSGKDMGEA SKDASFLLES PRAGNSSPNL PTSDMNEGYE 180 VKEALRAQME VQSKLHLQVE AEKHLQIRQS AEQRYMAMLE RACKMLADQF IGGSVIDTHN 240 QKYQGSGTKT PISSYIDPLG FYSSQSVEVA GVHGPEEVPN GLYPLRADCS TESCLTSHES 300 PGGLTLEGSP GGGKKSVLSL ESTASLIWSE TKVRPQEVNV AQVDRHGIPG YGM

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence Send to blast

MFPRLIQVQA HEGMMGQEDI QIQGVGLGGH GHGHGQNLRG DPCLVLTSDP KPRLRWTADL  60
HERFVDAVTQ LGGASSQSYA KGHHADDECE GTDSFPLKES PPAIIKTSPV ELLDGQKSNS  120
YGHIADELHF FPTFQKYRLG IQSGKDMGEA SKDASFLLES PRAGNSSPNL PTSDMNEGYE  180
VKEALRAQME VQSKLHLQVE AEKHLQIRQS AEQRYMAMLE RACKMLADQF IGGSVIDTHN  240
QKYQGSGTKT PISSYIDPLG FYSSQSVEVA GVHGPEEVPN GLYPLRADCS TESCLTSHES  300
PGGLTLEGSP GGGKKSVLSL ESTASLIWSE TKVRPQEVNV AQVDRHGIPG YGM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010096512.1	0.0	Myb family transcription factor APL
TrEMBL	W9R250	0.0	W9R250_9R
STRING	GLYMA15G12930.1	1e-134	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6618	33	49

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	5e-45	G2-like family protein

Link Out ? help Back to Top
Entrez Gene	21400947